TAP C3H in Eragrostis tef

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Protein source: Tef Improvement Project


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

zf-CCCH
AP2
zf-C2H2
SRF-TF
two_or_more_Myb_DNA-binding

(Domain names are clickable)



List of proteins (74)

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nameClick button to show/hide sequence: Download sequence?
augustus_masked-scaffold1050-abinit-gene-0.10-mRNA-1
augustus_masked-scaffold5233-abinit-gene-1.4-mRNA-1
augustus_masked-scaffold722-abinit-gene-3.1-mRNA-1
augustus_masked-scaffold7562-abinit-gene-0.7-mRNA-1
maker-scaffold1054-snap-gene-0.35-mRNA-1
maker-scaffold10749-snap-gene-0.11-mRNA-1
maker-scaffold10770-snap-gene-0.21-mRNA-1
maker-scaffold1314-snap-gene-0.25-mRNA-1
maker-scaffold1346-snap-gene-1.47-mRNA-1
maker-scaffold1346-snap-gene-3.56-mRNA-1
maker-scaffold1407-snap-gene-1.41-mRNA-1
maker-scaffold16311-augustus-gene-0.4-mRNA-1
maker-scaffold165-snap-gene-0.36-mRNA-1
maker-scaffold1740-snap-gene-1.15-mRNA-1
maker-scaffold1754-snap-gene-0.18-mRNA-1
maker-scaffold1869-augustus-gene-0.18-mRNA-1
maker-scaffold1996-snap-gene-2.43-mRNA-1
maker-scaffold2113-augustus-gene-0.32-mRNA-1
maker-scaffold2287-augustus-gene-0.8-mRNA-1
maker-scaffold231-snap-gene-0.38-mRNA-1
maker-scaffold242-augustus-gene-0.28-mRNA-1
maker-scaffold2530-snap-gene-1.13-mRNA-1
maker-scaffold2616-snap-gene-3.31-mRNA-1
maker-scaffold2684-augustus-gene-0.16-mRNA-1
maker-scaffold2730-snap-gene-0.41-mRNA-1
maker-scaffold2763-augustus-gene-0.20-mRNA-1
maker-scaffold2824-snap-gene-0.17-mRNA-1
maker-scaffold2913-snap-gene-1.44-mRNA-1
maker-scaffold3011-snap-gene-0.13-mRNA-1
maker-scaffold3108-snap-gene-0.43-mRNA-1
maker-scaffold312-snap-gene-0.3-mRNA-1
maker-scaffold312-snap-gene-0.4-mRNA-1
maker-scaffold312-snap-gene-0.7-mRNA-1
maker-scaffold3217-snap-gene-0.34-mRNA-1
maker-scaffold3217-snap-gene-0.37-mRNA-1
maker-scaffold3729-augustus-gene-0.28-mRNA-1
maker-scaffold3866-snap-gene-1.19-mRNA-1
maker-scaffold4175-augustus-gene-0.34-mRNA-1
maker-scaffold433-snap-gene-1.46-mRNA-1
maker-scaffold4339-snap-gene-1.12-mRNA-1
maker-scaffold496-augustus-gene-0.25-mRNA-1
maker-scaffold5033-snap-gene-0.20-mRNA-1
maker-scaffold5168-snap-gene-0.3-mRNA-1
maker-scaffold5168-snap-gene-0.4-mRNA-1
maker-scaffold5168-snap-gene-0.5-mRNA-1
maker-scaffold5168-snap-gene-0.6-mRNA-1
maker-scaffold5168-snap-gene-0.7-mRNA-1
maker-scaffold5417-snap-gene-0.43-mRNA-1
maker-scaffold5757-augustus-gene-0.38-mRNA-1
maker-scaffold661-snap-gene-1.50-mRNA-1
maker-scaffold661-snap-gene-1.51-mRNA-1
maker-scaffold7102-snap-gene-0.11-mRNA-1
maker-scaffold7292-snap-gene-0.38-mRNA-1
maker-scaffold7553-snap-gene-0.33-mRNA-1
maker-scaffold7553-snap-gene-0.34-mRNA-1
maker-scaffold7631-snap-gene-0.35-mRNA-1
maker-scaffold7662-snap-gene-0.45-mRNA-1
maker-scaffold7695-snap-gene-0.23-mRNA-1
maker-scaffold8089-snap-gene-0.51-mRNA-1
maker-scaffold818-snap-gene-0.34-mRNA-1
maker-scaffold8307-augustus-gene-0.21-mRNA-1
maker-scaffold850-augustus-gene-0.27-mRNA-1
maker-scaffold8674-augustus-gene-0.14-mRNA-1
maker-scaffold8847-augustus-gene-0.21-mRNA-1
maker-scaffold9319-snap-gene-1.18-mRNA-1
maker-scaffold9493-augustus-gene-0.12-mRNA-1
snap_masked-scaffold15854-abinit-gene-0.2-mRNA-1
snap_masked-scaffold2307-abinit-gene-0.14-mRNA-1
snap_masked-scaffold3006-abinit-gene-0.9-mRNA-1
snap_masked-scaffold3901-abinit-gene-0.22-mRNA-1
snap_masked-scaffold399-abinit-gene-0.16-mRNA-1
snap_masked-scaffold4339-abinit-gene-1.4-mRNA-1
snap_masked-scaffold4349-abinit-gene-2.18-mRNA-1
snap_masked-scaffold5807-abinit-gene-1.13-mRNA-1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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